Provoked by the discussion in the Mu thread [EDIT: 22Jan13: actually this thread!] about blond Aborigines here as gleaned from various sources is a simple general explanation of hair colour.
The colour exhibited by the hair of mammals is caused by the pigment melanin.
Melanin comes in 2 types that show different colours:
eumelanin = black-brown,
phaeomelanin = red-yellow.
The range of colours produced is down to:
i) how these pigments are deposited in the hair eg. uniformly, banded, etc
ii) the concentrations of the pigments, eg. 0-100%
For simplification we can assume 5 genes that determine the change from a base hair colour of all black - A B C D E.
A or Agouti gene locus
This gene prevents full eumelanin in 2 ways - 1) producing 'redyellow' banded (agouti) hairs on the dorsal (back/upper) side, 2) producing uniform redyellow hair on the ventral (stomach/lower) side.
5 main alleles can be considered [I've used brackets to indicate superscript here] in approximate order of dominance (strongest first)
A(y) - red hair on both dorsal and ventral
A(w) - Agouti hair on dorsal, red on ventral - this version of the gene is the most common 'wild' type
A - Agouti hair on dorsal and ventral
a(t) - black hair on dorsal, red on ventral - commonly called black and tan
a - black hair on both dorsal and ventral
NB Humans and apes appear to be missing the alleles that produce the agouti effect. A(y) often shows incomplete dominance depending on the species.
Brown locus
This affects the synthesis of eumelanin
B - full black expression
b - black diluted to (chocolate) brown
Colour locus
This affects the synthesis of both melanins but phaeomelanin is more affected.
C - full intensity i.e. no dilution of colour
c(d) - light dilution: black > dark/medium sepia; red > buff
c(k) - light dilution: black > dark sepia; red > buff
c(r) - full dilution of redyellow i.e. red > white
c - albino, full dilution: black > white, red > white
These dilutions are different and the alleles show much incomplete dominance/recessiveness across species e.g. CC(d) is often lighter than CC but darker than C(d)C(d).
NB sepia = dark brown, buff = dull yellow
Dilution Locus
This gene affects deposition of pigment
D - no dilution
d - blue dilution: black > darkgrey or 'blue'; red > silvery or flat colour
The dilution alleles are mainly found in dog varieties.
Extension Locus
This one influences the relative amounts of eumelanin to phaeomelanin.
E - full expression/extension of blackbrown and its dilutions
e - nonextension of blackbrown i.e. solid redyellow
Various species also have mask and partial extensions
E(m) - causes black mask in dogs
e(r) - causes redyellow spotting
There may also be E(s) dominant to E which causes total expression of blackbrown i.e. nonextension of redyellow (e.g. AAE(s)E(s) is totally black, AAEE is totally agouti).
Hope this proves helpful.
I also had a database which used the above to highlight the large range of hair colours in people but it's currently lost on a floppy disk somewhere. I'll post it when I find it
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Rgds Prof